{
  "markdown": "# Mediationverse Gemini CLI Extension\n\n[![License](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://opensource.org/licenses/Apache-2.0)\n[![Gemini CLI](https://img.shields.io/badge/Gemini%20CLI-Extension-purple)](https://github.com/google-gemini/gemini-cli)\n[![Version](https://img.shields.io/badge/version-1.2.0-green.svg)](NEWS.md)\n[![Commands](https://img.shields.io/badge/commands-33-orange.svg)](GEMINI.md)\n[![R Package Dev](https://img.shields.io/badge/R-Package%20Dev-blue.svg)](https://r-pkgs.org/)\n\n> 🚀 R package development with **agentic workflows** — Planning, Interactive, and Autonomous modes\n\n## Installation\n\n```bash\ngemini extensions install https://github.com/Data-Wise/mediationverse-gemini-extension\n```\n\n**New?** See the [Getting Started Guide](GETTING_STARTED.md) for a tutorial.\n\n## Orchestration Patterns\n\n| Pattern | Trigger | Behavior |\n|---------|---------|----------|\n| **Planning** | Complex tasks, new package | Plan → approval → execute |\n| **Interactive** | Normal development | Step-by-step with user |\n| **Agentic** | \"go ahead\", routine | Full workflow autonomously |\n\n## Commands (33)\n\n### 🚀 Setup & Planning\n\n| Command | Description |\n|---------|-------------|\n| `/r-help` | Show help and command reference |\n| `/r-init` | Initialize new package (planning-first) |\n| `/r-onboard` | Analyze existing package |\n| `/r-gather` | Quick package info (read-only) |\n| `/r-feedback` | Submit bug report or feature request |\n\n### 📋 Session Management\n\n| Command | Description |\n|---------|-------------|\n| `/r-resume` | Resume previous work |\n| `/r-save` | Save progress, end session |\n| `/r-learn` | Add to LEARNINGS.md |\n| `/r-plan` | Update planning docs |\n\n### 📦 Development\n\n| Command | Description |\n|---------|-------------|\n| `/r-check` | Run `devtools::check()` |\n| `/r-test` | Create/run testthat tests |\n| `/r-fix` | Auto-fix check issues |\n| `/r-lint` | Tidyverse style linting |\n| `/r-docs` | Generate roxygen2 docs |\n| `/r-s7` | S7 class creation |\n| `/r-usethis` | Run usethis commands |\n| `/r-cran` | CRAN submission prep |\n| `/r-updates` | Check package updates |\n\n### 🌐 Website & Docs\n\n| Command | Description |\n|---------|-------------|\n| `/r-readme` | Generate README.md |\n| `/r-news` | Create/update NEWS.md |\n| `/r-pkgdown` | Build pkgdown site |\n| `/r-llm-docs` | Generate llms.txt for AI |\n| `/r-quarto` | Quarto vignette workflow |\n\n### 🔄 Git & CI/CD\n\n| Command | Description |\n|---------|-------------|\n| `/r-git` | Branch management |\n| `/r-release` | Merge dev→main, tag, return |\n| `/r-actions` | Create GitHub Actions |\n| `/r-ci` | Monitor CI status |\n| `/finalize-task` | Generate commit message |\n\n### ✅ Quality & Review\n\n| Command | Description |\n|---------|-------------|\n| `/r-review` | CRAN code review |\n| `/review-and-teach` | Review + explain |\n| `/document-function` | Single function docs |\n| `/validate-inputs` | Add checkmate validation |\n| `/generate-test-with-comments` | Test with explanations |\n\n## Session Workflow\n\n```\nSTART  → /r-resume\nWORK   → Choose pattern above\nEND    → /r-save → /r-learn\nWEEKLY → /r-updates\n```\n\n## Related Packages\n\n- [RMediation](https://github.com/Data-Wise/RMediation)\n- [medfit](https://github.com/Data-Wise/medfit)\n- [probmed](https://github.com/Data-Wise/probmed)\n- [medsim](https://github.com/Data-Wise/medsim)\n\n## License\n\n[Apache License 2.0](LICENSE)\n",
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  "repo_slug": "data-wise/mediationverse-gemini-extension",
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}