{
  "markdown": "<p align=\"center\">\n  <img src=\"docs/images/banner.svg\" alt=\"Nagomi PubMed Research\" width=\"100%\"/>\n</p>\n\n<h1 align=\"center\">Nagomi PubMed Research</h1>\n<p align=\"center\">\n  <em>Forensic-grade PubMed research engine for Claude Code</em>\n</p>\n\n<p align=\"center\">\n  <img src=\"https://img.shields.io/badge/claude--code-plugin-8B5CF6?style=flat-square\" alt=\"Claude Code Plugin\"/>\n  <img src=\"https://img.shields.io/badge/PubMed-MCP-D4A574?style=flat-square\" alt=\"PubMed MCP\"/>\n  <img src=\"https://img.shields.io/badge/license-MIT-3D3D3D?style=flat-square\" alt=\"MIT License\"/>\n</p>\n\n---\n\n## What it does\n\nFive research tools accessible as slash commands in Claude Code:\n\n| Command | Description |\n|---------|-------------|\n| `/nagomi:search` | Search PubMed with PICO-structured queries |\n| `/nagomi:synthesis` | PhD-level evidence synthesis across studies |\n| `/nagomi:analyze` | Critical appraisal of article trustworthiness |\n| `/nagomi:verify` | Verify citations against PubMed records |\n| `/nagomi:export` | Export references in APA, Vancouver, or BibTeX |\n\nPlus a **research-assistant** agent for comprehensive literature reviews combining all tools.\n\n## Install\n\n```bash\nclaude plugin install avivlyweb/nagomi-pubmed-plugin\n```\n\nOr test locally:\n\n```bash\nclaude --plugin-dir /path/to/nagomi-pubmed-plugin\n```\n\nDependencies (Python 3.9+) are installed automatically on first use.\n\n## Usage\n\n```\n/nagomi:search CRISPR gene therapy sickle cell\n/nagomi:synthesis long COVID cognitive outcomes\n/nagomi:analyze 38547891\n/nagomi:verify 10.1001/jama.2023.12345\n/nagomi:export yoga neuroplasticity --format apa\n```\n\n## How it works\n\nThe plugin bundles a Python MCP server that queries PubMed E-utilities (NCBI) directly. No API key required. The server provides:\n\n- **Enhanced search** with study design classification and evidence leveling\n- **Trustworthiness analysis** using Oxford CEBM hierarchy and risk-of-bias assessment\n- **Research synthesis** with GRADE-style confidence ratings\n- **Reference verification** via fuzzy matching against PubMed records\n- **Citation export** in standard academic formats\n\n## License\n\nMIT\n",
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  "repo_slug": "avivlyweb/nagomi-pubmed-plugin",
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  "api": "https://agentalog.com/api/listings/plg_avivlyweb_nagomi_pubmed_plugin_nagomi_011487a7/readme"
}