{
  "markdown": "# Atlas MCP Server\n\n<div align=\"center\">\n\n[![npm version](https://img.shields.io/npm/v/atlas-pipeline-mcp.svg?style=flat-square&color=blue)](https://www.npmjs.com/package/atlas-pipeline-mcp)\n[![npm downloads](https://img.shields.io/npm/dm/atlas-pipeline-mcp.svg?style=flat-square&color=green)](https://www.npmjs.com/package/atlas-pipeline-mcp)\n[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg?style=flat-square)](https://opensource.org/licenses/MIT)\n[![TypeScript](https://img.shields.io/badge/TypeScript-5.0-blue?style=flat-square&logo=typescript)](https://www.typescriptlang.org/)\n[![Node.js](https://img.shields.io/badge/Node.js-18+-green?style=flat-square&logo=node.js)](https://nodejs.org/)\n\n**Enterprise-Grade Agentic AI Pipeline for Modern IDEs**\n\nAdvanced AI/ML-powered development tools with RAG search, ML bug prediction, intelligent code migration, and comprehensive test generation.\n\n[Installation](#installation) • [Features](#key-features) • [Tools](#available-tools) • [Usage](#usage-guide) • [Documentation](#advanced-integration)\n\n</div>\n\n---\n\n## Overview\n\nAtlas MCP Server transforms your IDE with intelligent development capabilities through a comprehensive analysis pipeline:\n\n**Intent → Context → Decomposition → Variants → Critique → Optimization**\n\nNatively integrated with **Cursor**, **Windsurf**, **Claude Desktop**, **GitHub Copilot**, and **VS Code**.\n\n---\n\n## What's New in Latest Version\n\n### Advanced Development Tools Suite\n\nThe latest version introduces six powerful tools designed to address complex development challenges:\n\n**New Advanced Analysis Tools:**\n\n<table>\n<tr>\n<td width=\"30%\"><b>Bug Oracle</b></td>\n<td>Predictive bug detection system analyzing code patterns, complexity metrics, and historical data to forecast potential issues before they occur</td>\n</tr>\n<tr>\n<td><b>Code Whisperer</b></td>\n<td>Intelligent code suggestion engine providing context-aware recommendations, pattern detection, and best practice enforcement</td>\n</tr>\n<tr>\n<td><b>Codebase Surgeon</b></td>\n<td>Precision refactoring tool for large-scale codebase transformations with dependency-aware modifications and impact analysis</td>\n</tr>\n</table>\n\n**Enhanced Development Experience:**\n\n<table>\n<tr>\n<td width=\"30%\"><b>Semantic Search</b></td>\n<td>Advanced code search with natural language understanding, finding code by intent rather than keywords</td>\n</tr>\n<tr>\n<td><b>Smart Merge Resolver</b></td>\n<td>Intelligent conflict resolution for git merges using code analysis and context understanding to suggest optimal merge strategies</td>\n</tr>\n<tr>\n<td><b>Tech Debt Quantifier</b></td>\n<td>Technical debt measurement and tracking system with actionable metrics and prioritized remediation roadmaps</td>\n</tr>\n</table>\n\n### Frontend Developer Tools\n\nComprehensive suite for modern frontend development:\n\n<table>\n<tr>\n<td width=\"30%\"><b>Performance Doctor</b></td>\n<td>Detects React/Vue re-render issues, bundle bloat, memory leaks, and provides specific code fixes with improvement estimates</td>\n</tr>\n<tr>\n<td><b>CSS Wizard</b></td>\n<td>CSS architecture analyzer - detects specificity conflicts, generates design tokens, converts between BEM/Tailwind/CSS Modules/styled-components</td>\n</tr>\n<tr>\n<td><b>Animation Studio</b></td>\n<td>Professional animation generator - CSS keyframes, Framer Motion, GSAP timelines, micro-interactions with accessibility support</td>\n</tr>\n<tr>\n<td><b>API Helper</b></td>\n<td>API integration assistant - generates TypeScript types, React Query/SWR hooks, mock data, Zod schemas, and error handling</td>\n</tr>\n</table>\n\n---\n\n## Senior Developer Tools\n\nExpert-level guidance and analysis:\n\n<table>\n<tr>\n<td width=\"30%\"><b>Senior Mentor</b></td>\n<td>Architectural guidance from a 15+ year veteran perspective with trade-off analysis and senior lessons</td>\n</tr>\n<tr>\n<td><b>Performance Optimizer</b></td>\n<td>Deep performance analysis with Web Vitals optimization and bottleneck detection</td>\n</tr>\n<tr>\n<td><b>Security Scanner</b></td>\n<td>Enterprise-grade vulnerability detection with compliance assessment (GDPR, CCPA, HIPAA, PCI-DSS)</td>\n</tr>\n<tr>\n<td><b>State Management Architect</b></td>\n<td>Pattern comparison and scalability analysis for Redux, Zustand, Jotai, Recoil, and more</td>\n</tr>\n<tr>\n<td><b>API Design Consultant</b></td>\n<td>RESTful and GraphQL API design review with best practices and documentation templates</td>\n</tr>\n</table>\n\n## AI/ML Powered Tools\n\nAdvanced machine learning capabilities:\n\n<table>\n<tr>\n<td width=\"30%\"><b>RAG Search</b></td>\n<td>Semantic code search with knowledge graphs and natural language queries</td>\n</tr>\n<tr>\n<td><b>ML Predictor</b></td>\n<td>Bug & performance prediction with 70-85% accuracy using machine learning</td>\n</tr>\n<tr>\n<td><b>Code Migration</b></td>\n<td>Intelligent migration (12 types: JS→TS, React upgrades, Callbacks→Async)</td>\n</tr>\n<tr>\n<td><b>Test Generator</b></td>\n<td>Advanced test generation with edge cases, mocks, and property-based testing</td>\n</tr>\n</table>\n\n## Core Professional Tools\n\nEssential development utilities:\n\n<table>\n<tr>\n<td width=\"30%\"><b>Refactor</b></td>\n<td>Code refactoring engine with complexity analysis</td>\n</tr>\n<tr>\n<td><b>Profiler</b></td>\n<td>Performance profiling & bottleneck detection (O(n), O(n²), etc.)</td>\n</tr>\n<tr>\n<td><b>Review</b></td>\n<td>Automated code review with quality scores and security checks</td>\n</tr>\n<tr>\n<td><b>Dependencies</b></td>\n<td>Dependency analysis, unused package detection, vulnerability scanning</td>\n</tr>\n<tr>\n<td><b>Dashboard</b></td>\n<td>Interactive HTML metrics dashboards with real-time data</td>\n</tr>\n<tr>\n<td><b>Security</b></td>\n<td>Security vulnerability scanning (CWE, OWASP standards)</td>\n</tr>\n<tr>\n<td><b>Test Gen</b></td>\n<td>Comprehensive test case generation (Jest, Vitest, Pytest, Mocha)</td>\n</tr>\n<tr>\n<td><b>Docs Gen</b></td>\n<td>Auto-generate documentation (JSDoc, TSDoc, PyDoc)</td>\n</tr>\n</table>\n\n---\n\n## Key Features\n\n<table>\n<tr>\n<td width=\"50%\" valign=\"top\">\n\n### AI/ML Capabilities\n- **RAG Search** - Semantic code understanding with knowledge graphs\n- **ML Prediction** - Bug & performance forecasting (70-85% accuracy)\n- **Code Migration** - 12 intelligent migration types\n- **Test Generation** - Advanced test suites with edge cases\n- **Bug Oracle** - Predictive bug detection and prevention\n- **Semantic Search** - Natural language code discovery\n\n</td>\n<td width=\"50%\" valign=\"top\">\n\n### Professional Tools\n- **Full Pipeline** - Intent → Context → Variants → Optimize\n- **Quality Analysis** - Code review, security, complexity\n- **Performance** - Profiling, bottleneck detection\n- **Automation** - Tests, docs, refactoring\n- **Tech Debt** - Quantification and tracking\n- **Merge Resolution** - Intelligent conflict handling\n\n</td>\n</tr>\n</table>\n\n### Why Choose Atlas?\n\n- **Zero Configuration**: No API keys required - leverages your IDE's built-in AI (Copilot/Cursor)\n- **33 Professional Tools**: Comprehensive suite covering all development needs\n- **Agentic Workflow**: DAG-based task decomposition for complex problems\n- **Context Aware**: Deep project structure, dependencies, and git history analysis\n- **High Performance**: LRU caching, request deduplication, parallel execution\n- **Enterprise Ready**: Production-grade tools with security and compliance features\n\n---\n\n## Installation\n\n### Quick Start (Recommended)\n\n**Step 1: Install Globally**\n\nOpen your terminal and run:\n\n```bash\nnpm install -g atlas-pipeline-mcp\n```\n\n**Step 2: Run Auto-Setup**\n\nAutomatically configure your IDE (Cursor or VS Code):\n\n```bash\natlas-mcp-setup\n```\n\n**Step 3: Restart IDE**\n\nRestart your editor. The Atlas server will be automatically connected and ready to use.\n\n---\n\n## Available Tools\n\n### Advanced Development & Analysis Tools\n\n<table>\n<tr>\n<td width=\"30%\"><code>atlas_bug_oracle</code></td>\n<td><b>Bug Oracle</b><br/>Predictive bug detection analyzing code patterns, complexity metrics, and historical data to forecast potential issues with 70-85% accuracy.</td>\n</tr>\n<tr>\n<td><code>atlas_code_whisperer</code></td>\n<td><b>Code Whisperer</b><br/>Context-aware code suggestions with pattern detection, best practice enforcement, and intelligent auto-completion.</td>\n</tr>\n<tr>\n<td><code>atlas_codebase_surgeon</code></td>\n<td><b>Codebase Surgeon</b><br/>Large-scale refactoring with dependency-aware modifications, impact analysis, and safe transformation strategies.</td>\n</tr>\n<tr>\n<td><code>atlas_semantic_search</code></td>\n<td><b>Semantic Search</b><br/>Natural language code search finding code by intent rather than keywords, with context understanding.</td>\n</tr>\n<tr>\n<td><code>atlas_smart_merge</code></td>\n<td><b>Smart Merge Resolver</b><br/>Intelligent git conflict resolution using code analysis and context to suggest optimal merge strategies.</td>\n</tr>\n<tr>\n<td><code>atlas_tech_debt</code></td>\n<td><b>Tech Debt Quantifier</b><br/>Measures and tracks technical debt with actionable metrics and prioritized remediation roadmaps.</td>\n</tr>\n</table>\n\n### AI/ML Powered Tools\n\n<table>\n<tr>\n<td width=\"30%\"><code>atlas_rag_search</code></td>\n<td><b>RAG-Powered Semantic Search</b><br/>Natural language code search with knowledge graphs. Ask \"how does auth work?\" and get contextual results.</td>\n</tr>\n<tr>\n<td><code>atlas_ml_predict</code></td>\n<td><b>ML Bug & Performance Prediction</b><br/>Predict bugs before production with 70-85% accuracy. Analyzes complexity, churn, and code patterns.</td>\n</tr>\n<tr>\n<td><code>atlas_migrate</code></td>\n<td><b>Intelligent Code Migration</b><br/>Automated migration support for 12 types: JS→TS, React upgrades, Callbacks→Async, and more.</td>\n</tr>\n<tr>\n<td><code>atlas_testgen_advanced</code></td>\n<td><b>Advanced Test Generation</b><br/>Generate comprehensive test suites with edge cases, mocks, stubs, and 90%+ coverage projection.</td>\n</tr>\n</table>\n\n### Core Pipeline & Analysis Tools\n\n<table>\n<tr>\n<td width=\"30%\"><code>atlas_pipeline</code></td>\n<td><b>Full Agentic Pipeline</b><br/>Complete workflow: Intent → Context → Decompose → Variants → Critique → Optimize</td>\n</tr>\n<tr>\n<td><code>atlas_intent</code></td>\n<td><b>Intent Analysis</b><br/>Extract actionable intent from natural language requests</td>\n</tr>\n<tr>\n<td><code>atlas_context</code></td>\n<td><b>Project Context Gathering</b><br/>Analyze project structure, dependencies, and file relationships</td>\n</tr>\n<tr>\n<td><code>atlas_git</code></td>\n<td><b>Git History Analysis</b><br/>Analyze commits, branches, file changes, and code evolution</td>\n</tr>\n<tr>\n<td><code>atlas_decompose</code></td>\n<td><b>Task Decomposition</b><br/>Break complex tasks into DAG (Directed Acyclic Graph) of subtasks</td>\n</tr>\n<tr>\n<td><code>atlas_variants</code></td>\n<td><b>Solution Variants</b><br/>Generate multiple implementation approaches with pros/cons analysis</td>\n</tr>\n</table>\n\n### Quality & Optimization Tools\n\n<table>\n<tr>\n<td width=\"30%\"><code>atlas_review</code></td>\n<td><b>Automated Code Review</b><br/>Comprehensive analysis with quality scores, security checks, and best practice validation</td>\n</tr>\n<tr>\n<td><code>atlas_critique</code></td>\n<td><b>Code Critique</b><br/>Deep review for quality, security, performance, and maintainability</td>\n</tr>\n<tr>\n<td><code>atlas_optimize</code></td>\n<td><b>Code Optimization</b><br/>Apply improvements based on critique feedback and best practices</td>\n</tr>\n<tr>\n<td><code>atlas_refactor</code></td>\n<td><b>Smart Refactoring</b><br/>Code restructuring with complexity metrics and structural analysis</td>\n</tr>\n<tr>\n<td><code>atlas_security</code></td>\n<td><b>Security Scanner</b><br/>Detect vulnerabilities with CWE IDs and OWASP category mapping</td>\n</tr>\n</table>\n\n### Senior Developer Tools\n\n<table>\n<tr>\n<td width=\"30%\"><code>atlas_senior_mentor</code></td>\n<td><b>Senior Mentor</b><br/>Architectural guidance from 15+ year veteran perspective with trade-off analysis and senior lessons</td>\n</tr>\n<tr>\n<td><code>atlas_performance_optimizer</code></td>\n<td><b>Performance Optimizer</b><br/>Deep performance analysis with Web Vitals optimization and bottleneck detection</td>\n</tr>\n<tr>\n<td><code>atlas_security_scanner</code></td>\n<td><b>Security Scanner Pro</b><br/>Enterprise-grade vulnerability detection with compliance assessment (GDPR, CCPA, HIPAA, PCI-DSS)</td>\n</tr>\n<tr>\n<td><code>atlas_state_architect</code></td>\n<td><b>State Management Architect</b><br/>Pattern comparison and scalability analysis for Redux, Zustand, Jotai, Recoil</td>\n</tr>\n<tr>\n<td><code>atlas_api_consultant</code></td>\n<td><b>API Design Consultant</b><br/>RESTful and GraphQL API design review with best practices and documentation templates</td>\n</tr>\n</table>\n\n### UI/UX Design Tools\n\n<table>\n<tr>\n<td width=\"30%\"><code>atlas_ui_ux_designer</code></td>\n<td><b>UI/UX Designer</b><br/>Find best design inspirations online, generate multiple design options with images, and create production-ready code. Supports React, Vue, HTML, Svelte with accessibility guidance.</td>\n</tr>\n</table>\n\n### Frontend Developer Tools\n\n<table>\n<tr>\n<td width=\"30%\"><code>atlas_performance_doctor</code></td>\n<td><b>Frontend Performance Doctor</b><br/>Detects React/Vue re-render issues, bundle bloat, memory leaks, Core Web Vitals issues. Provides specific code fixes with improvement estimates (e.g., \"30-50% fewer re-renders\").</td>\n</tr>\n<tr>\n<td><code>atlas_css_wizard</code></td>\n<td><b>CSS Architecture Wizard</b><br/>Analyzes CSS specificity conflicts, generates design tokens, converts between BEM/Tailwind/CSS Modules/styled-components/Emotion. Finds unused CSS and duplicates.</td>\n</tr>\n<tr>\n<td><code>atlas_animation_studio</code></td>\n<td><b>Animation Studio</b><br/>Professional animation generator with 30+ presets. Creates CSS keyframes, Framer Motion, GSAP, React Spring, and Anime.js code. Includes micro-interactions, scroll animations, and accessibility support.</td>\n</tr>\n<tr>\n<td><code>atlas_api_helper</code></td>\n<td><b>API Integration Helper</b><br/>Generates TypeScript types from API responses, React Query/SWR hooks, MSW mock handlers, Zod validation schemas, and complete API clients with error handling.</td>\n</tr>\n</table>\n\n### Development Productivity Tools\n\n<table>\n<tr>\n<td width=\"30%\"><code>atlas_profiler</code></td>\n<td><b>Performance Profiling</b><br/>Detect bottlenecks, analyze time complexity (O(n), O(n²)), and memory usage</td>\n</tr>\n<tr>\n<td><code>atlas_test</code></td>\n<td><b>Test Case Generation</b><br/>Generate comprehensive tests for Jest, Vitest, Pytest, Mocha</td>\n</tr>\n<tr>\n<td><code>atlas_docs</code></td>\n<td><b>Auto Documentation</b><br/>Generate JSDoc, TSDoc, or PyDoc documentation automatically</td>\n</tr>\n<tr>\n<td><code>atlas_dependencies</code></td>\n<td><b>Dependency Analysis</b><br/>Detect unused packages, analyze dependencies, scan for vulnerabilities</td>\n</tr>\n<tr>\n<td><code>atlas_dashboard</code></td>\n<td><b>Metrics Dashboard</b><br/>Generate interactive HTML dashboards with real-time metrics</td>\n</tr>\n<tr>\n<td><code>atlas_explain</code></td>\n<td><b>Code Explanation</b><br/>Explain code with complexity analysis and pattern detection</td>\n</tr>\n<tr>\n<td><code>atlas_debug</code></td>\n<td><b>Smart Debugging</b><br/>Root cause analysis, stack trace parsing, and fix suggestions</td>\n</tr>\n<tr>\n<td><code>atlas_think</code></td>\n<td><b>Advanced Reasoning</b><br/>Sequential reasoning with branching logic for complex problems</td>\n</tr>\n</table>\n\n### Utility Tools\n\n<table>\n<tr>\n<td width=\"30%\"><code>atlas_providers</code></td>\n<td><b>Provider Status</b><br/>Check available LLM providers and their current status</td>\n</tr>\n</table>\n\n---\n\n## Usage Guide\n\nOnce installed, interact with your AI Assistant (Copilot Chat or Cursor Chat). The appropriate tool is automatically activated based on your request.\n\n### Advanced Development Tools\n\n| Goal | Example Request | Tool Used |\n| :--- | :--- | :--- |\n| **Predict Bugs** | \"Analyze bug probability in this module\" | `atlas_bug_oracle` |\n| **Get Code Suggestions** | \"Suggest improvements for this function\" | `atlas_code_whisperer` |\n| **Large-Scale Refactoring** | \"Refactor the entire authentication system\" | `atlas_codebase_surgeon` |\n| **Search by Intent** | \"Find where we handle payment processing\" | `atlas_semantic_search` |\n| **Resolve Conflicts** | \"Help resolve this merge conflict intelligently\" | `atlas_smart_merge` |\n| **Measure Tech Debt** | \"Quantify technical debt in this project\" | `atlas_tech_debt` |\n\n### AI/ML Tools\n\n| Goal | Example Request | Tool Used |\n| :--- | :--- | :--- |\n| **Semantic Code Search** | \"Search for authentication code using RAG\" | `atlas_rag_search` |\n| **Predict Issues** | \"Predict bug probability in payment-processor.ts\" | `atlas_ml_predict` |\n| **Migrate Codebase** | \"Migrate this file from JavaScript to TypeScript\" | `atlas_migrate` |\n| **Advanced Testing** | \"Generate comprehensive tests with edge cases\" | `atlas_testgen_advanced` |\n\n### Professional Development Tools\n\n| Goal | Example Request | Tool Used |\n| :--- | :--- | :--- |\n| **Full Pipeline** | \"Run the pipeline on utils.ts to refactor it\" | `atlas_pipeline` |\n| **Refactor Code** | \"Refactor this code and reduce complexity\" | `atlas_refactor` |\n| **Performance Analysis** | \"Profile this code for performance bottlenecks\" | `atlas_profiler` |\n| **Code Review** | \"Review this PR for quality and security\" | `atlas_review` |\n| **Check Dependencies** | \"Analyze dependencies and find unused packages\" | `atlas_dependencies` |\n| **Plan Feature** | \"Decompose the task of adding JWT auth\" | `atlas_decompose` |\n| **Explore Solutions** | \"Generate 3 variants for this button component\" | `atlas_variants` |\n| **Review Code** | \"Critique this code for security issues\" | `atlas_critique` |\n| **Polish Code** | \"Optimize this function based on best practices\" | `atlas_optimize` |\n| **Security Scan** | \"Scan this code for security vulnerabilities\" | `atlas_security` |\n| **Generate Tests** | \"Generate tests for this authentication module\" | `atlas_test` |\n| **Add Documentation** | \"Document this API with examples\" | `atlas_docs` |\n| **Understand Code** | \"Explain how this algorithm works\" | `atlas_explain` |\n| **Debug Error** | \"Debug this TypeError, here's the stack trace...\" | `atlas_debug` |\n| **Complex Reasoning** | \"Think through how to design this system\" | `atlas_think` |\n| **Project Context** | \"Analyze the project context and dependencies\" | `atlas_context` |\n\n---\n\n## Advanced Integration\n\n### Using Local LLMs\n\nIf you prefer running models locally (e.g., Ollama) or want to use your own API keys instead of your IDE's subscription, configure the server manually in your settings:\n\n```json\n{\n  \"atlas\": {\n    \"command\": \"npx\",\n    \"args\": [\"-y\", \"atlas-pipeline-mcp\"],\n    \"env\": {\n      \"OLLAMA_BASE_URL\": \"http://localhost:11434\",\n      \"OPENAI_API_KEY\": \"sk-...\",\n      \"ANTHROPIC_API_KEY\": \"sk-...\"\n    }\n  }\n}\n```\n\n**Note:** If no API keys are provided, Atlas defaults to **Client Sampling mode**, delegating generation to your IDE's AI capabilities.\n\n---\n\n## Contributing\n\nWe welcome contributions to improve the Atlas pipeline.\n\n- **Repository**: [github.com/IamNishant51/atlas-mcp-server](https://github.com/IamNishant51/atlas-mcp-server)\n- **Issues**: Report bugs or request features on GitHub\n- **Pull Requests**: Submit improvements and new features\n\n---\n\n## License\n\nMIT License - see LICENSE file for details\n\n---\n\n**Built by Nishant Unavane**\n\n---\n🌐 **Check out my portfolio:** [nishantunavane.qzz.io](https://nishantunavane.qzz.io)\n\nFor support, documentation, or questions, visit our [GitHub repository](https://github.com/IamNishant51/atlas-mcp-server).\n",
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